Long ago, the humans and cats of Ulthar, city of cats, were struck by a great tragedy. For generations, the souls of those who were at the center of this tragedy have been sealed away by the king of cats. Chise and Elias travel to Ulthar in order to complete Simon's second task: to purify the spirits that remain.

Chise is deep in thought as she watches the souls return to where they'd belonged all along. More than ten days have passed since the incident at Ulthar, but she is still in a deep sleep. Elias and Simon stand worriedly by her side, when they are met by two unexpected guests: Titania, Queen of Fairies, Lord of Tír na nÓg.

With the church's requests fulfilled, things were supposed to go back to normal. But Elias has been acting strange since the last request: he'd vanished on the first morning after Chise had spent a night in his room. Neither Angelica's kind words nor Ruth's pure words are enough to put Chise's mind to rest.

Chise and Elias are in the middle of shearing Wooly Bugs, magical creatures who eat cold from the air and grow wool with magical properties. Chise becomes distracted and is attacked. As Chise recovers, she and Elias open themselves up to each other more.

With Chise being transformed into a fox, she takes off running into the woods. Elias chases after her. Later, Chise is visited by the Leanan sídhe, who is attached to Joel, claiming that Joel will not wake up.

Stella, a young girl Chise encountered while Christmas shopping, finds that her brother, Ethan, has gone missing and her parents have forgotten he exists.

Stella visits Chise with her payment of sweets. Elias, irritated by and jealous of Stella, runs away. Chise finds him hiding in a shadow but becomes worried as he restrains her and seems to want to eat her.

In the land of dragons two young dragons are kidnapped from Lindel by Cartaphilius. Chise awakens from a dark dream to find, Alice, Renfred, Adolf and college administrator Tory Innis in Elias’ home. They explain Cartaphilius stole the two dragons using a teleportation device he stole from Renfred and want Elias to find the dragons and take them home

Having captured Chise, Cartaphilus begins grafting parts of her onto himself. He forces her to relive some of her worst memories.

Elias earns the help of many, and they form a search party for Chise. Meanwhile, Chise and Cartaphilus relive his past together.

Cartaphilus and Chise argue over their respective approaches to dealing with their own suffering, beating each other up brutally in the process.