Clark rescues Lana from the storm, but discovers that the spaceship is released, while Jonathan is buried alive with the unscrupulous reporter who discovered Clark's secret. Meanwhile, Lex is wracked with guilt over his critically injured father.

A Smallville student, Ian, displays the ability to make clones of himself and uses his power to date both Chloe and Lana. Meanwhile Lex goes to anger management class and meets an attractive local doctor.

Whitney returns to Smallville, eager to start back up where he left off with Lana. But everything isn't what it seems...

Martha catches a lungful of kryptonite-irradiated spores and a weakened Clark is her only hope for survival.

After a schoolmate claims to be an alien and proves it by using heat vision, Clark investigates and believes the boy is from Krypton. Meanwhile, Helen confronts Lex over the locked room in the mansion that holds his investigation of Clark's secrets.

After Lana is almost assaulted by a college student, Clark injures the boy while helping her. When the Kents are sued for damages that could cost them the farm, Clark tries to find a way out of the lawsuit. Meanwhile, Helen's obsessive ex-boyfriend comes to Smallville to win her back but when she turns him down, he stabs her, prompting Lex to take the law into his own hands.

Dr. Walden comes out of a coma with super-powers and a desire to kill Clark, piquing the Luthors' interest. The spaceship starts talking to Clark, and Helen and Lex prepare for their wedding.

A sense of foreboding surrounds Smallville as Clark must choose between staying with Lana and his family or fulfilling his destiny to rule the Earth. Lex and Helen prepare for their marriage, and Chloe considers Lionel's offer to investigate Clark.

Under the influence of red kryptonite, Clark is following a life of crime in Metropolis while his friends and parents desperately try to find him. Lex is forced to confront his personal demons on a desert island, while Lionel holds a funeral for his presumed-dead son. And Jonathan Kent must pay a high price for the power necessary to bring his son back home.

Clark gives up the ring and its effects rather then kill his father, and both he and the rescued Lex return to Smallville. Clark must deal with crime lord Morgan Edge, who has followed him to Smallville, while Lex must determine who tried to have him killed - Lionel or Helen.